False discovery rate control with e-values

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August undefined, 2024

WebJan 11, 2024 · We design a natural analogue of the Benjamini-Hochberg (BH) procedure for false discovery rate (FDR) control that utilizes e-values, called the e-BH procedure, and compare it with the standard procedure for p-values. One of our central results is that, unlike the usual BH procedure, the e-BH procedure controls the FDR at the desired level ... WebControlling for the false discovery rate (FDR) is a way to identify as many significant features as possible while incurring a relatively low proportion of false positives. Steps …

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WebMar 14, 2024 · David S Robertson, Jan Wildenhain, Adel Javanmard, Natasha A Karp, onlineFDR: an R package to control the false discovery rate for growing data repositories, Bioinformatics, Volume 35, Issue 20, ... The BH procedure is an offline procedure (i.e. requiring all P-values to be available at once), and so in practice could not be applied to … WebJan 1, 2012 · In this article, we demonstrate the benefit of considering group structure by presenting a p-value weighting procedure which utilizes the relative importance of each … uhaul fort worth texas

A practical guide to methods controlling false discoveries in ...

WebWe study procedures for controlling the false discovery rate (FDR) as inBenjamini and Hochberg (1995). We will encounter p-values in this paper, but focus more on e-values … WebIn statistics, the false discovery rate (FDR) is a method of conceptualizing the rate of type I errors in null hypothesis testing when conducting multiple comparisons. FDR-controlling procedures are designed to control the … WebProvides functions for the joint analysis of K sets of p-values obtained for a same list of items. This joint analysis is performed by querying a composed hypothesis, i.e. an arbitrary complex combination of simple hypotheses, as described in Mary-Huard et al. (2024) < arXiv:2104.14601 >. The null distribution corresponding to the composed hypothesis of … thomas j gunning

Falsediscoveryratecontrolwithe-values - arXiv

WebSep 6, 2024 · False discovery rate control with e-values. E-values have gained recent attention as potential alternatives to p-values as measures of uncertainty, significance … WebFalse discovery rate control with e‐values. Ruodu Wang and Aaditya Ramdas. Journal of the Royal Statistical Society Series B, 2024, vol. 84, issue 3, 822-852 . Abstract: … thomas j hanson new richmond wiWebFalse discovery rate control with e-values. Journal of the Royal Statistical Society Series B (with Ramdas) (2024) 🔗. Admissible ways of merging p-values under arbitrary dependence. Annals of Statistics (with Vovk, … thomas j. guzzo md mph

"WebE-values have gained attention as potential alternatives to p-values as measures of uncertainty, signiﬁcance and evidence. In brief, e-values are realized by random … " - False discovery rate control with e-values

False discovery rate control with e-values

A general interactive framework for false discovery rate control …

WebTitle Q-value estimation for false discovery rate control Version 2.30.0 Date 2015-03-24 ... The argument statmust be such that the larger the value is the more deviated (i.e., "more extreme") ... Storey JD. (2003) The positive false discovery rate: A Bayesian interpretation and the q-value. An-nals of Statistics, 31: 2013-2035. WebAside: The False Non-Discovery Rate We can de ne a dual quantity to the FDR, the False Nondiscovery Rate (FNR). Begin with the False Nondiscovery Proprotion (FNP): the proportion of missed discoveries among those tests for which the null is retained. FNP(t) = X i 1 n Pi > t o Hi X i 1 n Pi > t o + 1 n all Pi t o= #False Nondiscoveries # ...

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WebJan 11, 2024 · Many methods for estimation or control of the false discovery rate (FDR) can be improved by incorporating information about π0, the proportion of all tested null … WebIn brief, e‐values are realized by random variables with expectation at most one under the null; examples include betting scores, (point null) Bayes factors, likelihood ratios and …

WebJul 31, 2024 · For false discovery rate (FDR) control, analogous to the Benjamini-Hochberg procedure with p-values (p-BH) and the recent e-BH procedure for e-values, we propose the ep-BH and the pe-BH procedures ... WebApr 9, 2024 · The traditional approaches to false discovery rate (FDR) control in multiple hypothesis testing are usually based on the null distribution of a test statistic. However, all types of null distributions, including the theoretical, permutation-based and empirical ones, have some inherent drawbacks. For example, the theoretical null might fail because of …

WebSep 6, 2024 · False discovery rate control with e-values. E-values have gained recent attention as potential alternatives to p-values as measures of uncertainty, significance … WebBackground In high-throughput studying, hundreds to millions of hypotheses are typically checked. Statistiken methods that control the false uncovering rate (FDR) have emerged as popular or powerful equipment for blunder rate control. During vintage FDR methods uses only pence values as input, more modern FDR process can is shown to increase …

WebThis Bayesian version of FDR usually gives higher power and better control of the false-positive rate than the original Benjamini-Hochberg ... There is an interesting connection between false discovery rate ... Calculate the accumulated p-value over the 4 tests. The p-values for the individual tests are, respective for season, 0.100, 0.279, 0. ...

thomas j. haines mathWebFalse discovery rate control with e-values. E-values have gained attention as potential alternatives to p-values as measures of uncertainty, significance and evidence. In brief, … thomas j hackneyWebAbstract: E-values have gained attention as potential alternatives to p-values as measures of uncertainty, significance and evidence. In brief, e-values are realized by random … thomas j hart pittstonWebDetails. It is common in ecology to search for statistical relationships between species' occurrence and a set of predictor variables. However, when a large number of variables is analysed (compared to the number of observations), false findings may arise due to repeated testing. Garcia (2003) recommended controlling the false discovery rate ... thomas j hartzell canton ohWebFalse Discovery Rate Control Under General Dependence By Symmetrized Data Aggregation Journal of the American Statistical Association 10.1080/01621459.2024.1945459 thomas j harringtonWebUterine and vaginal pH were evaluated after the last intravenous infusion, then endometrial biopsies were collected for RNA-sequencing with a HiSeq 4000. Cuffdiff (2.2.1) was used to identify the differentially expressed genes (DEG) between urea and control groups (false discovery rate-adjusted p-value < 0.1). There was a significant increase ... uhaul fort worth txWebJan 10, 2024 · The qvalue package performs false discovery rate (FDR) estimation from a collection of p-values or from a collection of test-statistics with corresponding empirical null statistics. This package produces estimates of three key quantities: q-values, the proportion of true null hypotheses (denoted by pi_0), and local false discovery rates. thomas j hawthorn