Dictyostelium intermediate repeat sequence
WebDictyostelium intermediate repeat sequence (DIRS) present in protist, plant, fungal, and animal genomes.(32) Eukaryotes have therefore been coevolving antagonistically with TEs throughoutmost or all of their evolutionary history.(33) TEs are highly mutagenic, accounting for 50% of deleterious muta- WebJan 27, 2024 · ments such as dictyostelium intermediate repeat sequence (DIRS), penel-ope-like elements (PLE), long interspersed nuclear element (LINE) and short interspersed nuclear element (SINE). Class I TEs include two sub-classes. Class II TEs are DNA transposons following a ‘cut-and-paste’ mechanism, characterized by terminal inverted …
Dictyostelium intermediate repeat sequence
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WebJan 1, 2013 · Dictyostelium intermediate repeat sequence (DIRS) elements on the other hand are restricted to the tips of the chromosomes where they form extensive clusters interspersed with some DNA elements. Three of these clusters could be reconstructed by making use of read pair and positional information on single nucleotide polymorphisms … WebOct 5, 2024 · Search worldwide, life-sciences literature Search. Advanced Search
WebMay 27, 2024 · This method can classify TE sequences into retrotransposon (class I), LTR, dictyostelium intermediate repeat sequence (DIRS), penelope-like element (PLE), large retrotransposon derivative (LARD), terminal-repeat retrotransposon in miniature (TRIM), LINE, SINE, DNA transposon (class II), terminal inverted repeat (TIR), miniature inverted … http://www.fishtedb.org/
WebFeb 23, 2024 · And then the software package RepeatMasker v4.0.6 was used to predict the repeat sequence of the QG10 genome based on the constructed repetitive sequence database ... Dictyostelium intermediate repeat sequence; LARD: large retrotransposon derivative; LINE: long interspersed nuclear element; LTR: long terminal repeat; PLE: … WebMar 6, 2024 · A k-mer map of k = 21 was constructed using the 350-bp library data (Fig. 2) for the evaluation of genome size, the repeat sequence ratio, ... DIRS: Dictyostelium intermediate repeat sequence; LARD: large retrotransposon derivative; LINE: long interspersed nuclear element; LTR: long terminal repeat; MITE: miniature inverted …
WebIt should be mentioned that even though DIRS is the abbreviation of Dictyostelium intermediate repeat sequence, retrotransposons related to DIRS have been found in diverse species and the term DIRS is now used as the name of a group whose members show similar protein domain composition. In this review, names representing a …
WebDictyostelium intermediate repeat sequence 1 (DIRS-1) is the founding member of a poorly characterized class of retrotransposable elements that contain inverse long terminal repeats and tyrosine recombinase instead of DDE-type integrase enzymes. In Dictyostelium discoideum, DIRS-1 forms clusters that adopt the function of … side effects of vegf inhibitorsWebJan 3, 2024 · The results provide a resource for the analysis and study of the repeat sequences in different lineages of plants. Results and discussion Retrotransposon … side effects of vegetarian dietWebMar 10, 2024 · Introduction. Dictyostelium discoideum is a free-living amoeba, and a well-established model organism for the study of basic aspects of differentiation, signal … side effects of vemurafenibWebcomplete element. In addition, the terminal repeats carry a 15-nucleotide sequence that greatly resembles the Drosophila con-sensus heat shock promoter and may be involved in the tran-scriptional induction of the DIRS-1 sequences. DIRS-1 (Dictyostelium intermediate repeat sequence 1) is a 4.7-kilobase-pair (kbp) Dictyostelium genomic … the place value of 6WebMay 1, 2005 · Each Dictyostelium chromosome carries a single cluster of repeats rich in DIRS (Dictyostelium intermediate repeat sequence) elements 20, 21 near one end 22, and this sole but striking structural consistency suggests that these clusters may serve as … the place value转座元件是一类能改变其自身在基因组当中的位置的DNA重复序列，它能够使得突变产生，也能“逆转”已有突变，它能改变生物细胞的遗传属性和基因组稳定性。1951年，美国冷泉港著名女性细胞遗传学家Barbara McClintock … See more 不论有无已经组装的基因组，从测序数据当中去找到并注释转座子序列都是可以的。依赖于参考基因组的注释策略主要有两类：一类是基于数据库进行 … See more side effects of vegetable glycerinWebAbstract. Dictyostelium intermediate repeat sequence 1 (DIRS-1) is the founding member of a poorly characterized class of retrotransposable elements that contain inverse … side effects of vein surgery